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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
3
October, 2022
1
August, 2021
1
March, 2019
1
March, 2023
Available data
310
bigWig
210
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
9
txt
6
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
6
Homo sapiens
Biosample type
4
primary cell
1
cell line
1
tissue
Organ
4
pancreas
3
epithelium
kidney
1
liver
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
ITG
Audit category:
3
audit script error
biosample_type!
stem cell
lab.title!
AMP-T2D consortium
organ_slims!
kidney
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
HepG2
1
tissue
islet of Langerhans
1
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