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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
Assay category
60
DNA accessibility
41
DNA methylation
33
Transcription
Date released
134
May, 2022
September, 2020
Available data
2817
bam
2582
bigWig
1580
tsv
1257
bed narrowPeak
1196
fastq
768
bigBed narrowPeak
279
bed broadPeak
262
bigBed broadPeak
251
bed bed3+
202
tagAlign
161
txt
134
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
134
Homo sapiens
Biosample type
134
primary cell
Organ
80
epithelium
80
pancreas
Project
134
HPAP
Lab
134
Klaus Kaestner, Upenn
biosample_type!
stem cell
month_released!
October, 2019
September, 2020
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
134 results
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Clear Filters
WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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