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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
100
ATAC-seq
27
ChIP-seq
1
pCHi-C
Assay category
145
Transcription
100
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
control
Date released
667
February, 2021
361
August, 2017
335
November, 2017
275
October, 2019
273
May, 2020
210
June, 2019
168
July, 2018
163
May, 2021
143
August, 2021
105
July, 2019
103
February, 2023
97
May, 2019
82
November, 2018
73
September, 2018
71
December, 2017
66
April, 2019
60
March, 2020
59
November, 2019
49
April, 2018
47
October, 2018
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
October, 2017
10
December, 2019
7
January, 2018
6
November, 2020
5
September, 2017
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
215
bam
215
bigWig
144
tsv
27
bed narrowPeak
27
tagAlign
Organism
273
Homo sapiens
Biosample type
170
tissue
102
primary cell
1
cell line
Organ
171
liver
Project
273
AMP
Genome assembly (visualization)
215
hg19
162
GRCh38
Lab
273
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
biosample_type!
stem cell
target.investigated_as!
control
BIOSAMPLE
ASSAY
273 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
27
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
HepG2
1
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