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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
3
WGBS
1
ATAC-seq
1
DNase-seq
1
RRBS
1
total RNA-seq
Assay category
48
DNA binding
4
DNA methylation
2
DNA accessibility
1
Transcription
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
28
fastq
26
bam
20
tagAlign
18
bed narrowPeak
18
bigWig
6
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
55
Homo sapiens
Biosample type
55
tissue
Organ
189
pancreas
127
connective tissue
59
adipose tissue
55
liver
29
epithelium
28
musculature of body
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
artery
1
eye
1
nerve
1
spinal cord
Project
55
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
1
inconsistent control read length
biosample_type!
stem cell
month_released!
February, 2021
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
total RNA-seq
tissue
liver
48
3
1
right lobe of liver
1
1
1
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