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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
candidate regulatory elements
109
accessible chromatin
97
target gene predictions
72
gene expression
64
chromatin state
43
binding sites
37
histone modifications
29
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
163
September, 2022
131
February, 2021
54
November, 2021
47
February, 2024
24
June, 2020
21
August, 2021
19
May, 2021
18
March, 2020
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
11
May, 2024
10
August, 2017
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
431
bed bed3+
92
tsv
76
bigWig
54
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
613
Homo sapiens
Biosample type
346
primary cell
153
tissue
57
cell line
57
in vitro differentiated cells
stem cell
Organ
959
epithelium
652
kidney
467
connective tissue
465
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
214
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
533
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
510
hg19
188
GRCh38
4
hg18
biosample_type!
stem cell
BIOSAMPLE
TYPE
613 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
2
8
3
13
1
1
4
2
fibroblast
3
16
4
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 48 more…
tissue
liver
13
4
10
1
9
1
2
7
1
1
adipose tissue
7
2
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 8 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
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in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
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