Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
candidate regulatory elements
146
target gene predictions
105
accessible chromatin
87
chromatin state
79
binding sites
53
gene expression
50
histone modifications
27
eQTL
18
variant allelic effects
14
differential activity
12
Fine-mapped variants
3
pQTL
2
caQTL
Date released
228
September, 2022
195
February, 2021
50
November, 2021
46
February, 2024
35
June, 2020
32
October, 2022
21
May, 2021
17
September, 2023
14
August, 2021
14
March, 2020
13
February, 2020
13
May, 2020
12
January, 2020
9
August, 2017
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
562
bed bed3+
78
bed bed9
77
tsv
57
bigWig
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
745
Homo sapiens
Biosample type
296
primary cell
239
cell line
160
tissue
50
in vitro differentiated cells
stem cell
Organ
949
epithelium
652
kidney
465
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
214
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
669
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
666
hg19
199
GRCh38
2
hg18
biosample_type!
stem cell
BIOSAMPLE
TYPE
745 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
3
2
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 47 more…
cell line
K562
7
23
1
7
2
1
GM12878
2
8
1
2
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 39 more…
tissue
adipose tissue
7
8
2
6
1
3
4
1
spinal cord
14
8
1
7
1
tibial nerve
6
3
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
See all biosamples
Download