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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
304
accessible chromatin
303
gene expression
221
candidate regulatory elements
211
target gene predictions
112
chromatin state
106
differential activity
81
binding sites
59
histone modifications
57
variant allelic effects
25
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
330
February, 2021
304
September, 2022
177
November, 2021
172
September, 2023
94
February, 2024
51
May, 2021
49
June, 2020
45
March, 2023
34
August, 2021
25
May, 2020
24
January, 2020
22
January, 2021
22
November, 2022
20
May, 2024
18
February, 2020
18
October, 2022
14
March, 2020
13
February, 2023
10
April, 2020
10
August, 2017
7
August, 2018
7
January, 2022
7
October, 2019
5
May, 2022
3
March, 2024
3
November, 2020
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
946
bed bed3+
390
tsv
231
bigWig
102
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1491
Homo sapiens
Biosample type
1120
primary cell
171
tissue
124
cell line
76
in vitro differentiated cells
stem cell
Organ
959
epithelium
652
kidney
467
connective tissue
465
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
214
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1104
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
1067
hg19
386
GRCh38
2
hg18
biosample_type!
stem cell
BIOSAMPLE
TYPE
1491 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
9
3
7
2
1
2
1
2
hepatocyte
8
13
2
3
1
1
4
2
fibroblast
16
3
4
1
6
2
pericyte cell
10
3
10
1
epithelial cell of proximal tubule
1
16
2
1
1
1
1
+ See 195 more…
tissue
adipose tissue
2
3
7
8
6
1
1
4
subcutaneous adipose tissue
2
5
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
5
2
2
2
3
prostate gland
1
4
2
2
2
2
1
+ See 28 more…
cell line
EndoC_BH1
8
8
1
3
1
22Rv1
4
2
2
1
1
GM23248
1
2
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
+ See 27 more…
in vitro differentiated cells
adipocyte
4
1
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
2
1
1
+ See 17 more…
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