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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
4
ATAC-seq
1
pCHi-C
Assay category
31
DNA accessibility
12
Transcription
6
DNA methylation
Date released
134
May, 2022
120
May, 2021
110
February, 2023
59
September, 2020
58
May, 2020
50
February, 2021
41
August, 2021
17
March, 2020
15
August, 2017
13
July, 2019
8
January, 2021
8
October, 2019
7
August, 2020
6
January, 2018
6
November, 2020
5
March, 2023
4
October, 2022
2
December, 2019
1
August, 2018
1
December, 2018
November, 2017
1
November, 2018
1
November, 2019
1
September, 2018
Available data
bam
107
bigWig
107
tsv
45
fastq
15
bed narrowPeak
8
tagAlign
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
50
Homo sapiens
Biosample type
tissue
45
primary cell
4
in vitro differentiated cells
1
cell line
Organ
6
epithelium
6
pancreas
4
connective tissue
1
liver
Project
45
HPAP
5
AMP
Genome assembly (visualization)
5
hg19
Lab
45
Klaus Kaestner, Upenn
5
AMP-T2D consortium
Audit category:
27
audit script error
biosample_type!
tissue
files.file_type!
bam
bigBed broadPeak
month_released!
November, 2017
BIOSAMPLE
ASSAY
50 results
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Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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