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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
45
histone
45
histone modification
24
broad histone mark
20
narrow histone mark
17
transcription factor
10
control
5
RNA binding protein
2
chromatin remodeller
Date released
16
August, 2017
4
June, 2019
Available data
16
bam
16
bed narrowPeak
16
bigWig
12
fastq
4
bigBed narrowPeak
4
tagAlign
Organism
20
Homo sapiens
Biosample type
16
in vitro differentiated cells
tissue
4
primary cell
Organ
47
epithelium
41
pancreas
20
connective tissue
14
liver
8
vasculature
7
blood vessel
7
embryo
6
vein
5
kidney
4
musculature of body
3
brain
2
heart
1
blood
1
bodily fluid
1
eye
0
spleen
Project
20
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
20
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
primary cell
cardiac fibroblast
2
mesenchymal stem cell
2
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