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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1836target gene predictions
  • 1039accessible chromatin
  • 888histone modifications
  • 781binding sites
  • 772candidate regulatory elements
  • 573gene expression
  • 482differential activity
  • 433chromatin state
  • 92variant allelic effects
  • 65eQTL
  • 23caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1949February, 2021
  • 1320July, 2026
  • 1134September, 2022
  • 358May, 2021
  • 352February, 2024
  • 333November, 2021
  • 320May, 2026
  • 286September, 2023
  • 226June, 2020
  • 101October, 2022
  • 95May, 2020
  • 82August, 2021
  • 64March, 2023
  • 56January, 2021
  • 50January, 2022
  • 47May, 2022
  • 40May, 2024
  • 27January, 2020
  • 27November, 2022
  • 24March, 2020
  • 21July, 2025
  • 19April, 2020
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 9October, 2019
  • 6February, 2023
  • 4November, 2019
  • 3November, 2020
  • 2January, 2025
  • 2March, 2024
  • 1July, 2020
  • 1June, 2021
Available data
  • 5477bed bed3+
  • 709tsv
  • 426bigWig
  • 383bed bed9
  • 108txt
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • bed bed3
  • 12bed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6954Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 1122EpiMap
  • 794ENCODE-rE2G
  • 488DGA
  • 485AMP
  • 471ENCODE
  • 393HDMA
  • 364T2DKP
  • 355T1D
  • 320pyxis
  • 281KPMP
  • 218BLUEPRINT
  • 1744DN
  • 133CATlas
  • 106 T2DKP
  • 55HPAP
  • 55T2D
  • 50CMDGA
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 2GTEx
Biosample type
  • tissue
  • 3921primary cell
  • 2559cell line
  • 514in vitro differentiated cells
  • 4stem cell
Organ
  • 890epithelium
  • 727blood
  • 421connective tissue
  • 385kidney
  • 334brain
  • 266skin of body
  • 220heart
  • 214bodily fluid
  • 207lung
  • 193pancreas
  • 182vasculature
  • 180embryo
  • 175liver
  • 130blood vessel
  • 102mammary gland
  • 86eye
  • 83bone element
  • 81intestine
  • 78uterus
  • 77musculature of body
  • 71prostate gland
  • 64large intestine
  • 62lymph node
  • 62penis
  • 60__MARKER__
  • 57adipose tissue
  • 52extraembryonic component
  • 49muscle organ
  • 41artery
  • 36thymus
  • 25adrenal gland
  • 24spleen
  • 23thyroid gland
  • 22vein
  • 21lymphatic vessel
  • 16bronchus
  • 15placenta
  • 13bone marrow
  • 12gonad
  • 11esophagus
  • 11stomach
  • 10pituitary gland
  • 9testis
  • 8limb
  • 8mouth
  • 7spinal cord
  • 6lymphoid tissue
  • 5skeleton
  • 5trachea
  • 4nose
  • 4small intestine
  • 2ovary
  • 2urinary bladder
  • 1pericardium
Project
  • 6294AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
Genome assembly (visualization)
  • 4544hg19
  • 2495GRCh38
  • 1hg18
biosample_type!
  • tissue
files.file_type!
  • bed bed3
BIOSAMPLE
TYPE

7000 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
histone modifications
binding sites
candidate regulatory elements
gene expression
differential activity
chromatin state
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte2188611544211
fibroblast2840131062
endothelial cell1723123925223
CD8-positive, alpha-beta T cell27430731
macrophage13213217382
cell line
A549331122118
HeLa-S359153
H1-hESC39112181
K5623011277
MCF-71312395
in vitro differentiated cells
hematopoietic multipotent progenitor cell2211119110
neural progenitor cell61015574
adipocyte7411416
embryonic stem cell16115
mesenchymal stem cell411132
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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