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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
107
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
64
histone
64
histone modification
33
narrow histone mark
30
broad histone mark
22
transcription factor
21
control
4
RNA binding protein
2
chromatin remodeller
Date released
359
May, 2021
260
November, 2017
148
May, 2020
125
February, 2021
112
August, 2017
90
August, 2021
73
September, 2018
67
October, 2019
62
November, 2018
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
34
February, 2023
31
July, 2019
31
June, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
11
November, 2020
8
January, 2021
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
3
June, 2018
2
October, 2018
1
October, 2022
Available data
112
bam
112
fastq
94
bigWig
76
bed narrowPeak
26
tagAlign
20
bigBed narrowPeak
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
112
Homo sapiens
Biosample type
tissue
67
in vitro differentiated cells
45
primary cell
Organ
67
connective tissue
41
pancreas
29
epithelium
Project
112
AMP
Genome assembly (visualization)
81
hg19
78
GRCh38
Lab
112
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
files.file_type!
bed broadPeak
lab.title!
Klaus Kaestner, Upenn
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
skeletal muscle myoblast
2
1
1
pancreatic acinar cell
1
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