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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
4
Hi-C
1
FAIRE-seq
Assay category
16
DNA binding
4
3D chromatin structure
1
DNA accessibility
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
3
control
Date released
17
October, 2019
2
July, 2019
1
March, 2020
1
November, 2017
Available data
25
bam
22
bigWig
17
bed narrowPeak
17
bigBed narrowPeak
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
3
fastq
2
hdf5
2
hic
1
bedpe bed3+
1
tar
Organism
21
Homo sapiens
Biosample type
tissue
21
primary cell
Organ
487
epithelium
440
pancreas
370
liver
130
connective tissue
91
vasculature
89
blood vessel
77
heart
69
blood
69
bodily fluid
artery
45
kidney
37
embryo
18
vein
13
musculature of body
10
brain
4
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
21
AMP
Genome assembly (visualization)
16
hg19
10
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
1
audit script error
biosample_type!
tissue
files.file_type!
bed broadPeak
organ_slims!
artery
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
15
2
1
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
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