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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
6
MeRIP-seq
4
total RNA-seq
1
DNase-seq
Assay category
9
DNA accessibility
4
Transcription
Target of assay
3
control
3
nucleotide modification
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
12
bigWig
7
fastq
6
bam
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
13
primary cell
6
cell line
tissue
Organ
13
epithelium
13
pancreas
6
connective tissue
Project
12
AMP
7
HPAP
Genome assembly (visualization)
13
GRCh38
6
hg19
Lab
7
Klaus Kaestner, Upenn
6
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bedpe
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ATAC-seq
MeRIP-seq
total RNA-seq
DNase-seq
primary cell
osteoblast
1
4
1
pancreatic alpha cell
5
pancreatic beta cell
2
cell line
EndoC_BH1
6
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