Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
20
accessible chromatin
12
binding sites
12
histone modifications
10
candidate regulatory elements
10
target gene predictions
7
chromatin state
4
gene expression
4
variant allelic effects
Date released
22
September, 2022
16
February, 2024
12
February, 2021
5
March, 2020
5
November, 2021
4
August, 2021
4
June, 2020
3
May, 2020
2
January, 2020
2
May, 2021
2
May, 2024
1
August, 2017
1
October, 2022
Available data
68
bed bed3+
21
bigWig
tsv
6
bed bed9
3
csv
Organism
79
Homo sapiens
Biosample type
tissue
47
primary cell
28
cell line
4
in vitro differentiated cells
Organ
576
epithelium
334
connective tissue
214
bodily fluid
204
blood
179
skin of body
170
embryo
139
vasculature
130
lung
116
brain
110
kidney
104
pancreas
91
blood vessel
85
mammary gland
79
liver
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
27
artery
22
vein
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
74
AMP
5
ENCODE
Genome assembly (visualization)
73
hg19
38
GRCh38
1
hg18
biosample_type!
tissue
files.file_type!
tsv
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
79 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
binding sites
histone modifications
candidate regulatory elements
target gene predictions
chromatin state
gene expression
variant allelic effects
primary cell
hepatocyte
8
1
4
2
3
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
3
1
2
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
5
2
3
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
Download