Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 839target gene predictions
  • 781binding sites
  • 772candidate regulatory elements
  • 716accessible chromatin
  • 433chromatin state
  • 92variant allelic effects
  • 54eQTL
  • 41gene expression
  • 11caQTL
  • 9differential activity
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2other
Date released
  • 1799February, 2021
  • 1134September, 2022
  • 333November, 2021
  • 290February, 2024
  • 270May, 2021
  • 226June, 2020
  • 101October, 2022
  • 95May, 2020
  • 56January, 2021
  • 50January, 2022
  • 47May, 2022
  • 42August, 2021
  • 38May, 2024
  • 27January, 2020
  • 27November, 2022
  • 19April, 2020
  • 19March, 2020
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 9March, 2023
  • 9October, 2019
  • 5February, 2023
  • 5September, 2023
  • 4November, 2019
  • 2January, 2025
  • 2November, 2020
  • 1June, 2021
Available data
  • 4157bed bed3+
  • tsv
  • 426bigWig
  • 383bed bed9
  • 108txt
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 4605Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 1122EpiMap
  • 468ENCODE
  • 390AMP
  • 364T2DKP
  • 320DGA
  • 269T1D
  • 180BLUEPRINT
  • 1744DN
  • 98 T2DKP
  • 55T2D
  • 49CMDGA
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • tissue
  • 2330cell line
  • 1920primary cell
  • 395in vitro differentiated cells
  • 4stem cell
Organ
  • 575epithelium
  • 336connective tissue
  • 214bodily fluid
  • 204blood
  • 179skin of body
  • 170embryo
  • 139vasculature
  • 130lung
  • 116brain
  • 110kidney
  • 104pancreas
  • 91blood vessel
  • 85mammary gland
  • 79liver
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 41heart
  • 40large intestine
  • 39eye
  • 27artery
  • 22vein
  • 19lymphatic vessel
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 4228AMP
  • 333ENCODE
  • 60T1D
  • 19LungMap
  • 11community
Genome assembly (visualization)
  • 4544hg19
  • 1166GRCh38
  • 1hg18
biosample_type!
  • tissue
files.file_type!
  • tsv
BIOSAMPLE
TYPE

4651 results

search-icontable-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
chromatin state
variant allelic effects
eQTL
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
cell line
HeLa-S355153
A549119221118
H1-hESC1392111
K5621232717
MCF-7263915
primary cell
monocyte8621184211
common myeloid progenitor, CD34-positive142713
CD8-positive, alpha-beta T cell305741
B cell101768
endothelial cell1723152112
in vitro differentiated cells
hematopoietic multipotent progenitor cell110119110
neural progenitor cell1555104
adipocyte161446
embryonic stem cell11165
mesenchymal stem cell131312
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego