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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
370
ChIP-seq
Assay category
370
DNA binding
Target of assay
255
transcription factor
68
control
66
recombinant protein
44
histone
44
histone modification
39
RNA binding protein
24
narrow histone mark
20
broad histone mark
16
chromatin remodeller
2
other context
2
other post-translational modification
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
89
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
0
April, 2020
Available data
370
fastq
369
bam
313
bigWig
291
bed narrowPeak
269
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
15
bed bed3+
12
tagAlign
3
tar
Organism
370
Homo sapiens
Biosample type
315
cell line
tissue
43
in vitro differentiated cells
9
primary cell
3
stem cell
Organ
330
liver
25
epithelium
13
embryo
9
brain
6
vasculature
3
blood vessel
Project
370
AMP
Genome assembly (visualization)
316
hg19
264
GRCh38
Lab
370
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
32
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
files.file_type!
vcf
BIOSAMPLE
ASSAY
370 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
stem cell
hESC
3
See all biosamples
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