Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
DNase-seq
6
ChIP-seq
Assay category
17
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
15
June, 2019
4
November, 2017
4
October, 2019
Available data
330
bam
312
bigWig
257
fastq
155
tsv
148
bed narrowPeak
85
bigBed narrowPeak
80
zippedFastqFolder
23
bed broadPeak
23
bigBed broadPeak
22
bed bed3+
7
bed bedMethyl
7
bigBed bedMethyl
7
tagAlign
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
23
Homo sapiens
Biosample type
tissue
23
primary cell
Organ
60
liver
22
epithelium
12
vasculature
11
brain
10
kidney
8
blood vessel
7
connective tissue
4
vein
3
heart
1
eye
1
musculature of body
1
pancreas
Project
23
AMP
Genome assembly (visualization)
21
GRCh38
17
hg19
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 9 more…
See all biosamples
Download