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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
RRBS
1
WGBS
Assay category
10
DNA methylation
Date released
8
July, 2019
1
August, 2017
1
November, 2018
Available data
1472
bam
1386
bigWig
981
fastq
824
bed narrowPeak
522
tsv
472
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
bed broadPeak
108
bigBed broadPeak
67
bed bed3+
13
bedpe bed3+
12
hic
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
10
Homo sapiens
Biosample type
tissue
9
primary cell
1
cell line
Organ
6
epithelium
3
kidney
2
liver
1
brain
1
connective tissue
1
eye
1
heart
musculature of body
1
vasculature
Project
10
AMP
Genome assembly (visualization)
9
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bed broadPeak
organ_slims!
musculature of body
spleen
BIOSAMPLE
ASSAY
10 results
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RRBS
WGBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
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