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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
295
transcription factor
81
recombinant protein
64
RNA binding protein
53
histone
53
histone modification
28
narrow histone mark
27
chromatin remodeller
25
broad histone mark
1
other context
1
other post-translational modification
Date released
8
June, 2019
8
October, 2019
7
December, 2017
2
May, 2019
Available data
174
bigWig
167
bed narrowPeak
156
bam
73
fastq
71
tagAlign
38
bigBed narrowPeak
bed broadPeak
16
bigBed broadPeak
6
bed bed3+
Organism
25
Homo sapiens
Biosample type
tissue
15
primary cell
7
in vitro differentiated cells
3
cell line
Organ
14
epithelium
7
liver
5
blood vessel
5
vasculature
5
vein
4
connective tissue
4
musculature of body
3
pancreas
2
kidney
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
5
mesenchymal stem cell
4
skeletal muscle satellite cell
4
kidney epithelial cell
2
in vitro differentiated cells
hepatocyte
7
cell line
Panc1
3
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