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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
3
ATAC-seq
3
DNase-seq
Assay category
85
DNA binding
6
DNA accessibility
Target of assay
63
histone
63
histone modification
34
narrow histone mark
28
broad histone mark
24
transcription factor
6
RNA binding protein
chromatin remodeller
1
control
Date released
265
May, 2021
262
November, 2017
107
February, 2021
91
August, 2017
90
May, 2020
72
September, 2018
50
November, 2018
48
July, 2018
47
August, 2021
47
June, 2019
47
October, 2019
43
April, 2018
35
December, 2017
31
February, 2018
25
December, 2018
22
July, 2019
14
January, 2019
12
November, 2019
9
March, 2020
7
August, 2020
6
January, 2018
5
December, 2019
5
November, 2020
5
September, 2017
4
May, 2019
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
2
October, 2018
Available data
109
bam
109
fastq
91
bigWig
73
bed narrowPeak
26
tagAlign
19
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
91
Homo sapiens
Biosample type
tissue
46
in vitro differentiated cells
45
primary cell
Organ
46
connective tissue
29
pancreas
17
epithelium
Project
91
AMP
Genome assembly (visualization)
91
hg19
87
GRCh38
Lab
91
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
9
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
files.file_type!
bedpe
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
45
1
primary cell
skeletal muscle myoblast
14
2
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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