Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 52single cell RNA-seq
  • 41WGBS
  • 39ATAC-seq
  • 21snATAC-seq
Assay category
  • 60DNA accessibility
  • 52Transcription
  • 41DNA methylation
Date released
  • 134May, 2022
  • 19September, 2020
Available data
  • 1485bam
  • 1397bigWig
  • 981fastq
  • 833bed narrowPeak
  • 524tsv
  • 481bigBed narrowPeak
  • 160tagAlign
  • 153zippedFastqFolder
  • 109bed broadPeak
  • 109bigBed broadPeak
  • 68bed bed3+
  • 13bedpe bed3+
  • 12hic
  • 11bed bedMethyl
  • 11bigBed bedMethyl
  • 7bed bed3
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 4txt
  • 3cool
  • 2csv
  • 2ibed
  • 1vcf
Organism
  • 153Homo sapiens
Biosample type
  • 153primary cell
Organ
  • 80epithelium
  • 80pancreas
Project
  • 153HPAP
Lab
  • 153Klaus Kaestner, Upenn
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

153 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell5221
pancreatic alpha cell2522
pancreatic beta cell1613
pancreatic acinar cell4
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego