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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
31
total RNA-seq
28
single cell RNA-seq
6
WGBS
Assay category
88
DNA binding
59
Transcription
6
DNA methylation
Target of assay
79
transcription factor
8
RNA binding protein
6
control
3
chromatin remodeller
Date released
39
November, 2017
25
December, 2018
18
September, 2020
17
April, 2018
16
November, 2018
15
February, 2018
8
January, 2019
8
July, 2018
6
February, 2021
1
June, 2018
Available data
151
fastq
129
bam
123
bigWig
82
bed narrowPeak
82
bigBed narrowPeak
47
tsv
2
zippedFastqFolder
Organism
153
Homo sapiens
Biosample type
88
cell line
tissue
50
primary cell
15
in vitro differentiated cells
Organ
45
blood
45
bodily fluid
43
liver
40
epithelium
40
pancreas
4
embryo
Project
129
AMP
24
HPAP
Genome assembly (visualization)
123
GRCh38
123
hg19
Lab
129
AMP-T2D consortium
24
Klaus Kaestner, Upenn
biosample_type!
tissue
BIOSAMPLE
ASSAY
153 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
WGBS
cell line
GM12878
45
HepG2
43
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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