Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 110total RNA-seq
  • 41WGBS
  • 7ChIP-seq
  • 1DNase-seq
Assay category
  • 110Transcription
  • 41DNA methylation
  • 7DNA binding
  • 1DNA accessibility
Target of assay
  • 7transcription factor
  • 1RNA binding protein
Date released
  • 76February, 2023
  • 41May, 2022
  • 26September, 2018
  • 6February, 2018
  • 4November, 2018
  • 2November, 2017
  • 2October, 2018
  • 1August, 2017
  • 1December, 2018
Available data
  • 118fastq
  • 42bam
  • 42bigWig
  • 41zippedFastqFolder
  • 34tsv
  • 8bed narrowPeak
  • 8bigBed narrowPeak
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 159Homo sapiens
Biosample type
  • 146primary cell
  • tissue
  • 7cell line
  • 6in vitro differentiated cells
Organ
  • 106epithelium
  • 106pancreas
  • 4blood
  • 4bodily fluid
  • 3liver
  • 1embryo
Project
  • 117HPAP
  • 42AMP
Genome assembly (visualization)
  • 42hg19
  • 41GRCh38
Lab
  • 117Klaus Kaestner, Upenn
  • 42AMP-T2D consortium
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

159 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
WGBS
ChIP-seq
DNase-seq
primary cell
pancreatic alpha cell3725
exocrine cell39
pancreatic beta cell2016
pancreatic acinar cell4
pancreatic ductal cell4
cell line
GM128784
HepG23
in vitro differentiated cells
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
pancreatic endoderm1
posterior foregut1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego