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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
total RNA-seq
41
WGBS
7
ChIP-seq
1
DNase-seq
Assay category
110
Transcription
41
DNA methylation
7
DNA binding
1
DNA accessibility
Target of assay
7
transcription factor
1
RNA binding protein
Date released
76
February, 2023
41
May, 2022
26
September, 2018
6
February, 2018
4
November, 2018
2
November, 2017
2
October, 2018
1
August, 2017
1
December, 2018
Available data
118
fastq
42
bam
42
bigWig
41
zippedFastqFolder
34
tsv
8
bed narrowPeak
8
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
159
Homo sapiens
Biosample type
146
primary cell
tissue
7
cell line
6
in vitro differentiated cells
Organ
106
epithelium
106
pancreas
4
blood
4
bodily fluid
3
liver
1
embryo
Project
117
HPAP
42
AMP
Genome assembly (visualization)
42
hg19
41
GRCh38
Lab
117
Klaus Kaestner, Upenn
42
AMP-T2D consortium
biosample_type!
tissue
BIOSAMPLE
ASSAY
159 results
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total RNA-seq
WGBS
ChIP-seq
DNase-seq
primary cell
pancreatic alpha cell
37
25
exocrine cell
39
pancreatic beta cell
20
16
pancreatic acinar cell
4
pancreatic ductal cell
4
+ See 1 more…
cell line
GM12878
4
HepG2
3
in vitro differentiated cells
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
pancreatic endoderm
1
posterior foregut
1
+ See 1 more…
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