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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
DNase-seq
23
ChIP-seq
Assay category
24
DNA accessibility
23
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
316
November, 2017
283
May, 2021
170
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
91
August, 2017
81
August, 2021
62
November, 2018
59
September, 2020
56
October, 2019
56
September, 2018
48
July, 2018
47
June, 2019
43
April, 2018
34
December, 2017
31
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
15
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
3
May, 2019
2
October, 2018
Available data
47
bam
39
bed narrowPeak
39
bigBed narrowPeak
39
bigWig
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
tissue
47
primary cell
Organ
20
epithelium
13
connective tissue
13
kidney
8
heart
7
musculature of body
5
brain
4
eye
4
vasculature
2
blood vessel
2
liver
Project
47
AMP
Genome assembly (visualization)
39
GRCh38
32
hg19
Lab
47
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
biosample_type!
tissue
lab.title!
Karen Mohlke, UNC
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
47 results
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Clear Filters
DNase-seq
ChIP-seq
primary cell
cardiac fibroblast
3
5
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
skeletal muscle satellite cell
4
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