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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
36
transcription factor
26
histone
26
histone modification
14
narrow histone mark
12
broad histone mark
9
control
4
RNA binding protein
3
chromatin remodeller
Date released
140
May, 2021
75
August, 2017
32
September, 2018
28
October, 2019
26
December, 2017
20
August, 2021
19
June, 2019
18
November, 2017
16
February, 2018
10
November, 2019
3
May, 2019
1
January, 2019
1
March, 2020
0
December, 2018
Available data
26
bam
26
fastq
25
bed narrowPeak
25
bigWig
12
bigBed narrowPeak
10
bed bed3+
Organism
26
Homo sapiens
Biosample type
24
in vitro differentiated cells
tissue
2
stem cell
Organ
14
epithelium
12
liver
6
embryo
Project
26
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
biosample_type!
tissue
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
12
pancreatic endoderm
4
Hepatic endoderm
2
Posterior foregut
2
definitive endodermal cell
2
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stem cell
hESC
2
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