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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
9
total RNA-seq
2
STARR-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
14
DNA binding
9
Transcription
1
3D chromatin structure
1
DNA sequencing
Target of assay
11
transcription factor
control
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
27
August, 2021
Available data
14
bed narrowPeak
14
bigWig
9
tsv
1
bedpe bed3+
1
hic
1
vcf
Organism
27
Homo sapiens
Biosample type
27
cell line
Organ
27
liver
2
kidney
Project
27
AMP
Genome assembly (visualization)
15
hg19
Lab
341
AMP-T2D consortium
27
Bing Ren, UCSD
biosample_type!
tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
STARR-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
14
9
2
1
1
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