Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
34
accessible chromatin
26
target gene predictions
21
candidate regulatory elements
11
binding sites
10
chromatin state
8
histone modifications
6
gene expression
6
variant allelic effects
2
caQTL
2
eQTL
Date released
30
November, 2021
29
February, 2021
27
September, 2022
19
February, 2024
6
June, 2020
4
May, 2021
4
October, 2022
3
May, 2022
1
February, 2020
1
January, 2020
1
May, 2020
1
October, 2019
Available data
110
bed bed3+
23
bigWig
10
bed bed9
1
bigBed bed9
Organism
126
Homo sapiens
Biosample type
tissue
73
primary cell
51
cell line
2
in vitro differentiated cells
Organ
868
epithelium
363
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
143
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
65
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
placenta
11
adrenal gland
11
bone marrow
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
96
AMP
30
ENCODE
Genome assembly (visualization)
125
hg19
43
GRCh38
biosample_type!
tissue
month_released!
January, 2021
organ_slims!
spleen
BIOSAMPLE
TYPE
126 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
gene expression
variant allelic effects
caQTL
eQTL
primary cell
skeletal muscle satellite cell
5
2
2
2
2
skeletal muscle fiber
5
2
2
type I muscle cell
3
1
1
1
1
type II muscle cell
3
1
1
1
1
colon epithelial cell
3
3
+ See 11 more…
cell line
HT-29
1
2
2
1
1
1
LHCN-M2
1
1
2
1
1
1
SW480
1
1
2
1
1
1
HCT116
3
2
1
A673
2
2
1
+ See 6 more…
in vitro differentiated cells
myotube
1
1
See all biosamples
Download