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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
3
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
tissue
14
primary cell
Organ
509
epithelium
441
pancreas
430
liver
137
connective tissue
103
vasculature
97
blood vessel
80
heart
69
blood
69
bodily fluid
68
artery
55
kidney
37
embryo
22
vein
21
brain
14
musculature of body
5
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
14
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
biosample_type!
tissue
month_released!
March, 2023
organ_slims!
gonad
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
1
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