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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
42
DNA binding
9
DNA accessibility
Target of assay
39
transcription factor
8
RNA binding protein
8
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
November, 2018
8
January, 2021
1
January, 2018
Available data
43
bigWig
42
bam
42
bed narrowPeak
42
bigBed narrowPeak
42
fastq
Organism
51
Homo sapiens
Biosample type
43
cell line
8
primary cell
Organ
479
epithelium
417
pancreas
322
liver
126
connective tissue
97
vasculature
92
blood vessel
76
heart
66
artery
51
blood
51
bodily fluid
49
kidney
30
embryo
20
vein
15
brain
12
musculature of body
4
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
43
AMP
8
T1D
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
43
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
biosample_type!
tissue
month_released!
November, 2018
organ_slims!
limb
target.investigated_as!
control
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
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