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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 120ChIP-seq
  • 3ATAC-seq
  • 3DNase-seq
  • 1RRBS
Assay category
  • 120DNA binding
  • 6DNA accessibility
  • 1DNA methylation
Target of assay
  • 75histone
  • 75histone modification
  • 38narrow histone mark
  • 36broad histone mark
  • 24transcription factor
  • 21control
  • 6RNA binding protein
  • 3chromatin remodeller
Date released
  • 359May, 2021
  • 324November, 2017
  • 170February, 2021
  • 148May, 2020
  • 134May, 2022
  • 127August, 2017
  • 110February, 2023
  • 90August, 2021
  • 73September, 2018
  • 72October, 2019
  • 62November, 2018
  • 59September, 2020
  • 55June, 2019
  • 48July, 2018
  • 46December, 2017
  • 43April, 2018
  • 39February, 2018
  • 31July, 2019
  • 28December, 2018
  • 24March, 2020
  • 23January, 2019
  • 21November, 2019
  • 12November, 2020
  • 8January, 2021
  • 7August, 2020
  • 7December, 2019
  • 6January, 2018
  • 5March, 2023
  • 5May, 2019
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 2October, 2018
Available data
  • 112bam
  • 112fastq
  • 94bigWig
  • 76bed narrowPeak
  • 26tagAlign
  • 20bigBed narrowPeak
  • 15bed broadPeak
  • 15bigBed broadPeak
  • 7bed bed3+
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 127Homo sapiens
Biosample type
  • tissue
  • 68in vitro differentiated cells
  • 59primary cell
Organ
  • 68connective tissue
  • 41pancreas
  • 29epithelium
Project
  • 127AMP
Genome assembly (visualization)
  • 96hg19
  • 91GRCh38
Lab
  • 127AMP-T2D consortium
Audit category:
  • 17missing controlled_by
Audit category:
  • 11inconsistent control read length
  • 2inconsistent assembly
  • 1inconsistent control run_type
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

127 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte671
primary cell
skeletal muscle myoblast1521
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
pancreatic acinar cell1
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