Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
25
DNase-seq
6
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
31
DNA binding
26
DNA accessibility
4
Transcription
Target of assay
19
histone
19
histone modification
11
control
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
3
nucleotide modification
Date released
359
May, 2021
322
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
29
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
Available data
61
bam
52
bigWig
49
bed narrowPeak
48
bigBed narrowPeak
25
bed bed3+
25
bed broadPeak
25
bigBed broadPeak
4
tsv
Organism
67
Homo sapiens
Biosample type
tissue
61
primary cell
6
cell line
Organ
26
epithelium
23
connective tissue
13
kidney
11
musculature of body
8
heart
6
pancreas
5
brain
4
eye
4
vasculature
2
blood vessel
2
liver
Project
67
AMP
Genome assembly (visualization)
53
GRCh38
46
hg19
Lab
61
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
31
inconsistent ontology term
biosample_type!
tissue
organ_slims!
adipose tissue
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
MeRIP-seq
total RNA-seq
ATAC-seq
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
osteoblast
1
4
1
cardiac muscle cell
3
1
+ See 18 more…
cell line
EndoC_BH1
6
See all biosamples
Download