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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
MeRIP-seq
5
ChIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
5
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
4
control
3
histone
3
histone modification
3
nucleotide modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
30
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
11
bam
9
bigWig
6
bed narrowPeak
5
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
tissue
11
primary cell
6
cell line
Organ
11
epithelium
6
connective tissue
6
pancreas
5
kidney
Project
17
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
11
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
biosample_type!
tissue
month_released!
October, 2017
organ_slims!
pericardium
BIOSAMPLE
ASSAY
17 results
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Clear Filters
MeRIP-seq
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
primary cell
osteoblast
4
1
1
kidney epithelial cell
5
cell line
EndoC_BH1
6
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