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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 165ChIP-seq
  • 143total RNA-seq
  • 34ATAC-seq
  • 16pCHi-C
  • 1DNAme array
Assay category
  • 165DNA binding
  • 143Transcription
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 359May, 2021
  • 324November, 2017
  • 170February, 2021
  • 148May, 2020
  • 134May, 2022
  • 127August, 2017
  • 110February, 2023
  • 90August, 2021
  • 73September, 2018
  • 72October, 2019
  • 62November, 2018
  • 59September, 2020
  • 55June, 2019
  • 48July, 2018
  • 46December, 2017
  • 43April, 2018
  • 39February, 2018
  • 31July, 2019
  • 28December, 2018
  • 24March, 2020
  • 23January, 2019
  • 21November, 2019
  • 12November, 2020
  • 8January, 2021
  • 7August, 2020
  • 7December, 2019
  • 6January, 2018
  • 5March, 2023
  • 5May, 2019
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 2October, 2018
Available data
  • 265bigWig
  • 239bam
  • 135tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 359Homo sapiens
Biosample type
  • 206primary cell
  • 132in vitro differentiated cells
  • tissue
  • 21cell line
Organ
  • 26epithelium
  • 24pancreas
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1heart
Project
  • 207AMP
  • 152T1D
Genome assembly (visualization)
  • 278hg19
  • 238GRCh38
Lab
  • 233Kyle Gaulton, UCSD
  • 126AMP-T2D consortium
Audit category:
  • 90inconsistent ontology term
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

359 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte85521311
CD8-positive, alpha-beta T cell3321
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
B cell1
activated CD4-positive, alpha-beta T cell1
adult endothelial progenitor cell1
alternatively activated macrophage1
embryonic stem cell1
erythroblast1
inflammatory macrophage1
macrophage1
megakaryocyte1
naive B cel1
naive thymus-derived CD8-positive, alpha-beta T cell1
in vitro differentiated cells
cardiomyocytes359
embryonic stem cell3755
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
endothelial cell1
hematopoietic multipotent progenitor cell1
intermediate cardiomyocytes1
intermediate endothelial cell1
intermediate smooth muscle cell1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
smooth muscle cell1
stem cell1
cell line
EndoC_BH11416
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