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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 165ChIP-seq
  • 143total RNA-seq
  • 34ATAC-seq
  • 16pCHi-C
  • 1DNAme array
Assay category
  • 165DNA binding
  • 143Transcription
  • 34DNA accessibility
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 359May, 2021
  • 324November, 2017
  • 170February, 2021
  • 148May, 2020
  • 134May, 2022
  • 127August, 2017
  • 110February, 2023
  • 90August, 2021
  • 73September, 2018
  • 72October, 2019
  • 62November, 2018
  • 59September, 2020
  • 55June, 2019
  • 48July, 2018
  • 46December, 2017
  • 43April, 2018
  • 39February, 2018
  • 31July, 2019
  • 28December, 2018
  • 24March, 2020
  • 23January, 2019
  • 21November, 2019
  • 12November, 2020
  • 8January, 2021
  • 7August, 2020
  • 7December, 2019
  • 6January, 2018
  • 5March, 2023
  • 5May, 2019
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 2October, 2018
Available data
  • 265bigWig
  • 239bam
  • 135tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 359Homo sapiens
Biosample type
  • 206primary cell
  • 132in vitro differentiated cells
  • tissue
  • 21cell line
Organ
  • 26epithelium
  • 24pancreas
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1heart
Project
  • 207AMP
  • 152T1D
Genome assembly (visualization)
  • 278hg19
  • 238GRCh38
Lab
  • 233Kyle Gaulton, UCSD
  • 126AMP-T2D consortium
Audit category:
  • 90inconsistent ontology term
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

359 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte85521311
CD8-positive, alpha-beta T cell3321
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes359
embryonic stem cell3755
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
cell line
EndoC_BH11416
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