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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 47ChIP-seq
  • 8total RNA-seq
  • 6ATAC-seq
  • 6DNase-seq
  • 4Hi-C
  • 1FAIRE-seq
Assay category
  • 47DNA binding
  • 13DNA accessibility
  • 8Transcription
  • 43D chromatin structure
Target of assay
  • 28histone
  • 28histone modification
  • 16broad histone mark
  • 12control
  • 12narrow histone mark
  • 7recombinant protein
  • 7transcription factor
Date released
  • 359May, 2021
  • 324November, 2017
  • 170February, 2021
  • 148May, 2020
  • 134May, 2022
  • 127August, 2017
  • 110February, 2023
  • 90August, 2021
  • 73September, 2018
  • 72October, 2019
  • 62November, 2018
  • 59September, 2020
  • 55June, 2019
  • 48July, 2018
  • 46December, 2017
  • 43April, 2018
  • 39February, 2018
  • 31July, 2019
  • 28December, 2018
  • 24March, 2020
  • 23January, 2019
  • 21November, 2019
  • 12November, 2020
  • 8January, 2021
  • 7August, 2020
  • 7December, 2019
  • 6January, 2018
  • 5March, 2023
  • 5May, 2019
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 2October, 2018
Available data
  • 64bam
  • 47bigWig
  • 38bed narrowPeak
  • 23bigBed narrowPeak
  • 8tsv
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 4bed bed3+
  • 3hic
  • 2bedpe bed3+
  • 1hdf5
  • 1tar
Organism
  • 72Homo sapiens
Biosample type
  • tissue
  • 34primary cell
  • 30cell line
  • 8in vitro differentiated cells
Organ
  • 35epithelium
  • 26kidney
  • 21blood vessel
  • 21vasculature
  • 21vein
  • 15pancreas
  • 2connective tissue
  • 1liver
Project
  • 72AMP
Genome assembly (visualization)
  • 54hg19
  • 46GRCh38
Lab
  • 72AMP-T2D consortium
Audit category:
  • 21inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

72 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein17211
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)111
cardiomyocytes (cardiac muscle cell)111
adipocyte2
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