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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
accessible chromatin
41
gene expression
41
target gene predictions
35
differential activity
29
candidate regulatory elements
20
binding sites
13
chromatin state
12
histone modifications
8
variant allelic effects
1
caQTL
Date released
49
February, 2021
46
September, 2022
41
March, 2023
30
May, 2021
20
January, 2021
18
November, 2021
15
February, 2024
11
June, 2020
7
August, 2018
5
October, 2019
5
September, 2023
3
October, 2022
2
February, 2020
2
February, 2023
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
Available data
167
bed bed3+
65
tsv
44
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
258
Homo sapiens
Biosample type
tissue
155
primary cell
100
cell line
3
in vitro differentiated cells
Organ
898
epithelium
373
connective tissue
351
kidney
214
bodily fluid
204
blood
185
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
100
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
43
heart
40
large intestine
39
eye
33
artery
24
lymphatic vessel
22
vein
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
213
AMP
20
T1D
18
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
181
hg19
40
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
258 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
binding sites
chromatin state
histone modifications
variant allelic effects
caQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
GM12864
1
1
2
2
1
1
GM12865
1
1
2
2
1
1
MM.1S
1
2
2
1
1
1
GM10248
1
1
2
1
1
+ See 17 more…
in vitro differentiated cells
pancreatic ductal cell
3
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