Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
accessible chromatin
55
gene expression
44
differential activity
41
target gene predictions
25
candidate regulatory elements
18
binding sites
15
chromatin state
11
variant allelic effects
9
histone modifications
2
caQTL
Date released
45
March, 2023
43
September, 2022
36
February, 2021
30
May, 2021
29
February, 2024
21
November, 2021
20
January, 2021
20
September, 2023
7
August, 2018
5
May, 2020
5
October, 2019
4
January, 2020
4
June, 2020
3
February, 2023
2
April, 2020
2
February, 2020
2
March, 2020
2
October, 2022
1
August, 2017
1
June, 2021
1
November, 2019
Available data
166
bed bed3+
88
tsv
56
bigWig
14
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
283
Homo sapiens
Biosample type
240
primary cell
tissue
40
cell line
3
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
218
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
180
hg19
62
GRCh38
biosample_type!
tissue
organ_slims!
intestine
vagina
BIOSAMPLE
TYPE
283 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
candidate regulatory elements
binding sites
chromatin state
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell of umbilical vein
2
4
6
2
5
1
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 32 more…
cell line
EndoC_BH1
8
8
3
1
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download