Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 21candidate regulatory elements
  • 20gene expression
  • 18accessible chromatin
  • 16binding sites
  • 12chromatin state
  • 12target gene predictions
  • 11differential activity
  • 5histone modifications
  • 3variant allelic effects
  • 2caQTL
Date released
  • 30September, 2022
  • 26February, 2021
  • 20September, 2023
  • 14February, 2024
  • 4January, 2020
  • 4March, 2023
  • 4May, 2020
  • 3June, 2020
  • 3November, 2021
  • 2April, 2020
  • 2February, 2020
  • 2February, 2023
  • 2May, 2021
  • 2October, 2022
  • 1August, 2017
  • 1March, 2020
Available data
  • 76bed bed3+
  • 29tsv
  • 15bigWig
  • 11bed bed9
  • 2bigBed bed9
Organism
  • 120Homo sapiens
Collection Tags
  • 27EpiMap
  • 23DGA
  • 20KPMP
  • 16ENCODE
  • 15ChIP-Atlas
  • 6AMP
  • 4HPAP
  • 3T2DKP
  • 2CMDGA
Biosample type
  • tissue
  • 114primary cell
  • 6cell line
Organ
  • 897epithelium
  • 375connective tissue
  • 351kidney
  • 214bodily fluid
  • 204blood
  • 185vasculature
  • 180embryo
  • 179skin of body
  • 163pancreas
  • 130lung
  • 120blood vessel
  • 117brain
  • 100liver
  • 85mammary gland
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 43heart
  • 40large intestine
  • 39eye
  • 33artery
  • 24lymphatic vessel
  • 22vein
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 95AMP
  • 20KPMP
  • 3ENCODE
  • 2LungMap
Genome assembly (visualization)
  • 85hg19
  • 35GRCh38
biosample_type!
  • tissue
BIOSAMPLE
TYPE

120 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
binding sites
chromatin state
target gene predictions
differential activity
histone modifications
variant allelic effects
caQTL
primary cell
endothelial cell of umbilical vein622541
endothelial cell of hepatic sinusoid466
dermis blood vessel endothelial cell622
fibroblast of pulmonary artery212111
pulmonary artery endothelial cell211111
cell line
smooth muscle cell of the coronary artery1111
vein endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego