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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
204
target gene predictions
197
accessible chromatin
176
candidate regulatory elements
103
chromatin state
95
binding sites
92
differential activity
53
histone modifications
41
variant allelic effects
2
caQTL
1
eQTL
Date released
292
September, 2022
279
February, 2021
155
September, 2023
127
November, 2021
94
February, 2024
41
May, 2021
38
March, 2023
37
June, 2020
29
October, 2022
23
August, 2021
20
January, 2021
15
May, 2020
14
January, 2020
8
April, 2020
8
February, 2020
6
August, 2017
6
August, 2018
6
March, 2020
6
November, 2022
5
October, 2019
2
February, 2023
2
May, 2022
1
July, 2020
1
November, 2019
Available data
769
bed bed3+
322
tsv
156
bigWig
97
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1215
Homo sapiens
Biosample type
845
primary cell
344
cell line
tissue
26
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
0
breast
Project
903
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
868
hg19
301
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
1215 results
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Clear Filters
gene expression
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
9
7
15
2
1
2
2
1
hepatocyte
13
3
8
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
2
6
5
2
1
+ See 150 more…
cell line
A549
19
1
21
18
2
1
K562
23
1
7
7
2
1
EndoC_BH1
8
1
8
3
1
GM12878
8
1
2
2
2
1
IMR-90
2
1
2
1
2
1
+ See 45 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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