Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 30candidate regulatory elements
  • 29target gene predictions
  • 19accessible chromatin
  • 15chromatin state
  • 11binding sites
  • 7variant allelic effects
  • 5histone modifications
  • 1gene expression
Date released
  • 45September, 2022
  • 25February, 2021
  • 11May, 2021
  • 10June, 2020
  • 8January, 2020
  • 7May, 2020
  • 6October, 2022
  • 3September, 2023
  • 1February, 2024
  • 1January, 2022
Available data
  • 101bed bed3+
  • 15bed bed9
  • 9bigWig
  • 1tsv
Organism
  • 117Homo sapiens
Collection Tags
  • 45EpiMap
  • 21ENCODE
  • 20ChIP-Atlas
  • 18DGA
  • 5AMP
Biosample type
  • tissue
  • 77cell line
  • 35primary cell
  • 4in vitro differentiated cells
  • 1stem cell
Organ
  • 897epithelium
  • 375connective tissue
  • 351kidney
  • 214bodily fluid
  • 204blood
  • 185vasculature
  • 180embryo
  • 179skin of body
  • 163pancreas
  • 130lung
  • 120blood vessel
  • 117brain
  • 100liver
  • 85mammary gland
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 43heart
  • 40large intestine
  • 39eye
  • 33artery
  • 24lymphatic vessel
  • 22vein
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 117AMP
Genome assembly (visualization)
  • 116hg19
  • 24GRCh38
biosample_type!
  • tissue
BIOSAMPLE
TYPE

117 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
cell line
SK-N-DZ42121
SK-N-SH4321
pituitary stalk10
SK-N-MC211121
BE(2)-C111121
primary cell
choroid plexus epithelial cell211111
astrocyte of the cerebellum21111
astrocyte of the hippocampus21111
cardiac fibroblast32
brain microvascular endothelial cell2111
in vitro differentiated cells
hippocampal neuron11
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
stem cell
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego