Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 80accessible chromatin
  • 69candidate regulatory elements
  • 66target gene predictions
  • 38chromatin state
  • 33gene expression
  • 30binding sites
  • 24histone modifications
  • 13variant allelic effects
  • 12differential activity
  • 6eQTL
  • 2caQTL
  • 2sQTL
Date released
  • 96September, 2022
  • 83February, 2021
  • 50November, 2021
  • 20June, 2020
  • 17September, 2023
  • 14February, 2024
  • 13May, 2021
  • 12October, 2022
  • 10May, 2024
  • 7March, 2023
  • 7May, 2020
  • 6January, 2020
  • 6November, 2022
  • 5August, 2017
  • 5February, 2020
  • 3April, 2020
  • 3January, 2022
  • 3May, 2022
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2March, 2020
  • 2October, 2019
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1June, 2021
Available data
  • 292bed bed3+
  • 48bigWig
  • 39tsv
  • 33bed bed9
  • 7txt
  • 2csv
  • 1bigBed bed9
  • 1bigBed narrowPeak
Organism
  • 375Homo sapiens
Collection Tags
  • 96EpiMap
  • 63ChIP-Atlas
  • 57AMP
  • 54T2DKP
  • 49DGA
  • 47ENCODE
  • 16 T2DKP
  • 15KPMP
  • 9CMDGA
  • 7HPAP
  • 6FNIH_projects-heart
  • 6T1D
  • 4T2D
  • 3eQTLCatalogue
  • 2FNIH_projects-liver
  • 1BLUEPRINT
Biosample type
  • 293primary cell
  • tissue
  • 50in vitro differentiated cells
  • 31cell line
  • 1stem cell
Organ
  • 897epithelium
  • 375connective tissue
  • 351kidney
  • 214bodily fluid
  • 204blood
  • 185vasculature
  • 180embryo
  • 179skin of body
  • 163pancreas
  • 130lung
  • 120blood vessel
  • 117brain
  • 100liver
  • 85mammary gland
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 43heart
  • 40large intestine
  • 39eye
  • 33artery
  • 24lymphatic vessel
  • 22vein
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 301AMP
  • 50ENCODE
  • 15KPMP
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 323hg19
  • 105GRCh38
biosample_type!
  • tissue
BIOSAMPLE
TYPE

375 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
caQTL
sQTL
primary cell
fibroblast1634162
pericyte cell103101
osteoblast5221232
fibroblast of lung6442
foreskin fibroblast162142
in vitro differentiated cells
adipocyte4466111
mesenchymal stem cell133211
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
GM23248121111
fibroblast of cardiac tissue212
HT1080211
foreskin fibroblast111
adipose tissue derived mesenchymal stem cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego