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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
13
histone
13
histone modification
9
narrow histone mark
8
control
4
broad histone mark
4
transcription factor
1
RNA binding protein
Date released
5
December, 2017
3
February, 2018
1
June, 2019
Available data
9
bam
8
bed narrowPeak
8
bigWig
8
fastq
1
bed bed3+
1
bigBed narrowPeak
Organism
9
Homo sapiens
Biosample type
8
in vitro differentiated cells
tissue
1
primary cell
Organ
49
epithelium
41
pancreas
20
connective tissue
16
liver
8
embryo
8
vasculature
7
blood vessel
6
vein
5
kidney
4
musculature of body
3
brain
2
heart
1
blood
1
bodily fluid
1
eye
Project
9
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
biosample_type!
tissue
organ_slims!
lung
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
primary cell
retinal pigment epithelial cell
1
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