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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
accessible chromatin
44
target gene predictions
35
gene expression
33
differential activity
29
candidate regulatory elements
15
chromatin state
10
binding sites
9
histone modifications
9
variant allelic effects
1
eQTL
Date released
49
September, 2022
41
March, 2023
35
February, 2021
30
May, 2021
20
January, 2021
20
November, 2021
16
February, 2024
7
August, 2018
7
June, 2020
5
October, 2019
1
February, 2023
1
January, 2022
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
151
bed bed3+
59
tsv
42
bigWig
15
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
237
Homo sapiens
Biosample type
tissue
140
primary cell
94
cell line
3
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
195
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
168
hg19
42
GRCh38
biosample_type!
tissue
organ_slims!
lymphoid tissue
BIOSAMPLE
TYPE
237 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 17 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
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