Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
40
target gene predictions
15
accessible chromatin
10
candidate regulatory elements
5
binding sites
4
chromatin state
4
histone modifications
3
variant allelic effects
Date released
24
July, 2026
19
November, 2021
14
February, 2021
12
September, 2022
5
February, 2024
4
June, 2020
2
May, 2021
1
October, 2022
Available data
77
bed bed3+
11
bigWig
4
bed bed9
Organism
81
Homo sapiens
Collection Tags
24
ENCODE-rE2G
19
AMP
19
T2DKP
12
ChIP-Atlas
12
EpiMap
7
ENCODE
5
DGA
2
4DN
Biosample type
tissue
58
cell line
23
primary cell
Organ
891
epithelium
727
blood
422
connective tissue
385
kidney
334
brain
266
skin of body
220
heart
214
bodily fluid
207
lung
193
pancreas
182
vasculature
180
embryo
175
liver
130
blood vessel
102
mammary gland
86
eye
83
bone element
81
intestine
81
musculature of body
78
uterus
71
prostate gland
64
large intestine
62
lymph node
62
penis
60
__MARKER__
57
adipose tissue
52
extraembryonic component
49
muscle organ
41
artery
36
thymus
25
adrenal gland
24
spleen
23
thyroid gland
22
vein
21
lymphatic vessel
16
bronchus
15
placenta
13
bone marrow
12
gonad
11
esophagus
11
stomach
10
pituitary gland
9
testis
8
limb
8
mouth
7
spinal cord
6
lymphoid tissue
5
skeleton
5
trachea
4
nose
4
small intestine
2
ovary
2
urinary bladder
1
pericardium
Project
62
AMP
19
ENCODE
Genome assembly (visualization)
57
hg19
49
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
81 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
chromatin state
histone modifications
variant allelic effects
cell line
HCT116
19
2
1
HT-29
3
1
2
1
1
1
SW480
2
1
2
1
1
1
RKO
1
1
1
1
1
Caco-2
3
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
See all biosamples
Download