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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
accessible chromatin
50
target gene predictions
41
gene expression
33
differential activity
25
candidate regulatory elements
13
binding sites
13
chromatin state
11
histone modifications
11
variant allelic effects
2
caQTL
2
eQTL
Date released
41
March, 2023
40
September, 2022
38
February, 2021
35
November, 2021
32
May, 2021
31
February, 2024
20
January, 2021
7
August, 2018
7
June, 2020
6
October, 2019
4
October, 2022
3
May, 2022
2
May, 2020
1
February, 2020
1
February, 2023
1
January, 2020
1
June, 2021
1
March, 2020
1
November, 2019
Available data
183
bed bed3+
59
tsv
56
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bigBed bed9
Organism
272
Homo sapiens
Biosample type
tissue
182
primary cell
85
cell line
5
in vitro differentiated cells
Organ
898
epithelium
373
connective tissue
351
kidney
214
bodily fluid
204
blood
185
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
100
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
43
heart
40
large intestine
39
eye
33
artery
24
lymphatic vessel
22
vein
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
215
AMP
35
ENCODE
20
T1D
2
community
Genome assembly (visualization)
203
hg19
57
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
272 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
binding sites
chromatin state
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 22 more…
cell line
EndoC_BH1
8
1
8
3
1
HT-29
1
2
2
1
1
1
LHCN-M2
1
1
2
1
1
1
SW480
1
1
2
1
1
1
HCT116
3
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
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