Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 22gene expression
  • 20accessible chromatin
  • 12binding sites
  • 12histone modifications
  • 10candidate regulatory elements
  • 10target gene predictions
  • 7chromatin state
  • 4variant allelic effects
  • 3differential activity
Date released
  • 28February, 2024
  • 22September, 2022
  • 16February, 2021
  • 5March, 2020
  • 5November, 2021
  • 4August, 2021
  • 4June, 2020
  • 4March, 2023
  • 3May, 2020
  • 2January, 2020
  • 2May, 2021
  • 2May, 2024
  • 1August, 2017
  • 1July, 2020
  • 1October, 2022
Available data
  • 68bed bed3+
  • 21bigWig
  • 21tsv
  • 6bed bed9
  • 3csv
Organism
  • 100Homo sapiens
Collection Tags
  • 42DGA
  • 26AMP
  • 18EpiMap
  • 13ChIP-Atlas
  • 10T2DKP
  • 6 T2DKP
  • 4HPAP
  • 3ENCODE
  • 2FNIH_projects-liver
Biosample type
  • 65primary cell
  • tissue
  • 28cell line
  • 7in vitro differentiated cells
Organ
  • 897epithelium
  • 375connective tissue
  • 351kidney
  • 214bodily fluid
  • 204blood
  • 185vasculature
  • 180embryo
  • 179skin of body
  • 163pancreas
  • 130lung
  • 120blood vessel
  • 117brain
  • 100liver
  • 85mammary gland
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 43heart
  • 40large intestine
  • 39eye
  • 33artery
  • 24lymphatic vessel
  • 22vein
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 95AMP
  • 5ENCODE
Genome assembly (visualization)
  • 73hg19
  • 47GRCh38
  • 1hg18
biosample_type!
  • tissue
BIOSAMPLE
TYPE

100 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
binding sites
histone modifications
candidate regulatory elements
target gene predictions
chromatin state
variant allelic effects
differential activity
primary cell
hepatocyte138142312
endothelial cell of hepatic sinusoid466
hepatic stellate cell1312111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
cell line
HepG2235232
HuH-7111111
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte211
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego