Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
45
candidate regulatory elements
24
target gene predictions
20
chromatin state
18
binding sites
13
accessible chromatin
10
histone modifications
1
variant allelic effects
Date released
60
September, 2022
51
February, 2021
13
June, 2020
3
May, 2021
2
February, 2024
2
October, 2022
Available data
111
bed bed3+
20
bed bed9
Organism
131
Homo sapiens
Biosample type
121
cell line
tissue
10
primary cell
Organ
898
epithelium
373
connective tissue
351
kidney
214
bodily fluid
204
blood
185
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
100
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
43
heart
40
large intestine
39
eye
33
artery
24
lymphatic vessel
22
vein
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
131
AMP
Genome assembly (visualization)
131
hg19
21
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
131 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
cell line
22Rv1
4
2
2
1
1
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
MM.1S
2
2
1
1
1
1
LNCaP clone FGC
3
2
2
+ See 21 more…
primary cell
epithelial cell of prostate
4
3
2
luminal epithelial cell of prostatic duct
1
See all biosamples
Download