Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3accessible chromatin
  • 3candidate regulatory elements
  • 2binding sites
  • 2chromatin state
  • 2target gene predictions
  • 1histone modifications
Date released
  • 6September, 2022
  • 3February, 2021
  • 2November, 2021
  • 1June, 2020
  • 1October, 2022
Available data
  • 11bed bed3+
  • 2bed bed9
  • 2bigWig
Organism
  • 13Homo sapiens
Collection Tags
  • 6EpiMap
  • 3ChIP-Atlas
  • 2AMP
  • 2ENCODE
  • 2T2DKP
Biosample type
  • tissue
  • 10primary cell
  • 3cell line
Organ
  • 897epithelium
  • 375connective tissue
  • 351kidney
  • 214bodily fluid
  • 204blood
  • 185vasculature
  • 180embryo
  • 179skin of body
  • 163pancreas
  • 130lung
  • 120blood vessel
  • 117brain
  • 100liver
  • 85mammary gland
  • 70uterus
  • 69musculature of body
  • 67bone element
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 43heart
  • 40large intestine
  • 39eye
  • 33artery
  • 24lymphatic vessel
  • 22vein
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1pericardium
  • 1thymus
Project
  • 11AMP
  • 2ENCODE
Genome assembly (visualization)
  • 13hg19
  • 4GRCh38
biosample_type!
  • tissue
BIOSAMPLE
TYPE

13 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
binding sites
chromatin state
target gene predictions
histone modifications
primary cell
fibroblast of villous mesenchyme122111
placental hematopoietic stem cell1
placental villus capillary endothelial cell1
cell line
HTR-8/Svneo111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego