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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 781binding sites
  • 772candidate regulatory elements
  • 716accessible chromatin
  • 617target gene predictions
  • 573gene expression
  • 433chromatin state
  • 162differential activity
  • 92variant allelic effects
  • 60eQTL
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2Fine-mapped variants
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1949February, 2021
  • 1134September, 2022
  • 352February, 2024
  • 286September, 2023
  • 247May, 2021
  • 226June, 2020
  • 222November, 2021
  • 101October, 2022
  • 95May, 2020
  • 82August, 2021
  • 64March, 2023
  • 56January, 2021
  • 50January, 2022
  • 47May, 2022
  • 40May, 2024
  • 27January, 2020
  • 27November, 2022
  • 24March, 2020
  • 19April, 2020
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 9October, 2019
  • 6February, 2023
  • 6March, 2025
  • 4November, 2019
  • 3November, 2020
  • 2January, 2025
  • 2March, 2024
  • 1July, 2020
  • 1June, 2021
Available data
  • 3935bed bed3+
  • 694tsv
  • 426bigWig
  • 383bed bed9
  • 108txt
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 5077Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 1122EpiMap
  • 471ENCODE
  • 377DGA
  • 374AMP
  • 355T1D
  • 281KPMP
  • 253T2DKP
  • 218BLUEPRINT
  • 1744DN
  • 93 T2DKP
  • 55HPAP
  • 55T2D
  • 50CMDGA
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 6STARNET
  • 2GTEx
Biosample type
  • tissue
  • 2360primary cell
  • 2304cell line
  • 453in vitro differentiated cells
  • 4stem cell
Organ
  • 839epithelium
  • 351kidney
  • 347connective tissue
  • 210bodily fluid
  • 200blood
  • 182vasculature
  • 175embryo
  • 169skin of body
  • 151pancreas
  • 123lung
  • 118blood vessel
  • 106brain
  • 97liver
  • 80mammary gland
  • 68uterus
  • 67bone element
  • 64musculature of body
  • 61lymph node
  • 61penis
  • 61prostate gland
  • 47intestine
  • 46extraembryonic component
  • 39eye
  • 38heart
  • 35large intestine
  • 32artery
  • 23lymphatic vessel
  • 21vein
  • 15bronchus
  • 13bone marrow
  • 13placenta
  • 10gonad
  • 8esophagus
  • 8mouth
  • 8testis
  • 7adrenal gland
  • 7limb
  • 7spinal cord
  • 7stomach
  • 6lymphoid tissue
  • 5adipose tissue
  • 5trachea
  • 4nose
  • 2small intestine
  • 2thyroid gland
  • 1ovary
  • 1pericardium
  • 1thymus
Project
  • 4528AMP
  • 281KPMP
  • 222ENCODE
  • 60T1D
  • 19LungMap
  • 13community
Genome assembly (visualization)
  • 4322hg19
  • 1064GRCh38
  • 1hg18
biosample_type!
  • tissue
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

5123 results

search-icontable-tab-icon
Clear Filters
histone modifications
binding sites
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
Fine-mapped variants
other
representative DNase hypersensitivity sites
primary cell
monocyte861182154211
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell3074231
B cell176928
endothelial cell1231519212
cell line
HeLa-S315543
A549122111818
H1-hESC12113881
K5621271227
MCF-7239155
in vitro differentiated cells
neural progenitor cell15510574
hematopoietic multipotent progenitor cell1119110110
adipocyte1144216
embryonic stem cell11615
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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