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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 781binding sites
  • 716accessible chromatin
  • 465target gene predictions
  • 433chromatin state
  • 398candidate regulatory elements
  • 120differential activity
  • 92variant allelic effects
  • 60eQTL
  • 11caQTL
  • 9gene expression
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2Fine-mapped variants
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1800February, 2021
  • 386September, 2022
  • 333November, 2021
  • 287February, 2024
  • 270May, 2021
  • 226June, 2020
  • 115September, 2023
  • 101October, 2022
  • 95May, 2020
  • 56January, 2021
  • 50January, 2022
  • 47May, 2022
  • 42August, 2021
  • 40May, 2024
  • 27January, 2020
  • 27November, 2022
  • 19April, 2020
  • 16August, 2017
  • 15March, 2020
  • 9March, 2023
  • 9October, 2019
  • 6February, 2023
  • 6March, 2025
  • 4November, 2019
  • 2January, 2025
  • 2November, 2020
  • 1June, 2021
Available data
  • 3409bed bed3+
  • 426bigWig
  • 383bed bed9
  • 129tsv
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 3945Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 458ENCODE
  • 395AMP
  • 374EpiMap
  • 364T2DKP
  • 299DGA
  • 269T1D
  • 180BLUEPRINT
  • 1744DN
  • 110KPMP
  • 86 T2DKP
  • 55T2D
  • 50CMDGA
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 6STARNET
Biosample type
  • tissue
  • 1973cell line
  • 1686primary cell
  • 326in vitro differentiated cells
  • 4stem cell
Organ
  • 540epithelium
  • 272connective tissue
  • 164bodily fluid
  • 158blood
  • 130embryo
  • 127kidney
  • 127vasculature
  • 117skin of body
  • 92pancreas
  • 86brain
  • 83blood vessel
  • 76lung
  • 72liver
  • 64uterus
  • 57mammary gland
  • 53musculature of body
  • 49intestine
  • 46lymph node
  • 45bone element
  • 42penis
  • 41prostate gland
  • 32large intestine
  • 31eye
  • 31heart
  • 28extraembryonic component
  • 23artery
  • 18vein
  • 17lymphatic vessel
  • 12bronchus
  • 11adrenal gland
  • 11bone marrow
  • 11stomach
  • 10pituitary gland
  • 9gonad
  • 9placenta
  • 8esophagus
  • 6limb
  • 6testis
  • 5spinal cord
  • 5trachea
  • 4adipose tissue
  • 4lymphoid tissue
  • 4mouth
  • 4small intestine
  • 3thyroid gland
  • 2nose
  • 2ovary
  • 1thymus
Project
  • 3456AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
Genome assembly (visualization)
  • 3784hg19
  • 1175GRCh38
  • 1hg18
biosample_type!
  • tissue
software_used.software.name!
  • r
BIOSAMPLE
TYPE

3991 results

search-icontable-tab-icon
Clear Filters
histone modifications
binding sites
accessible chromatin
target gene predictions
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
eQTL
caQTL
gene expression
hQTL
sQTL
meQTL
Fine-mapped variants
other
representative DNase hypersensitivity sites
cell line
HeLa-S315232
H1-hESC121381
K5621211771
A5491211183
breast cancer cell119
primary cell
monocyte8611824211
CD8-positive, alpha-beta T cell304517
endothelial cell121573212
fibroblast1164362
macrophage12333911
in vitro differentiated cells
neural progenitor cell1510141
hematopoietic multipotent progenitor cell111109
adipocyte114462
embryonic stem cell11615
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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