Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
595
binding sites
559
histone modifications
336
target gene predictions
278
candidate regulatory elements
162
chromatin state
148
accessible chromatin
10
eQTL
9
differential activity
4
variant allelic effects
Date released
1228
February, 2021
461
September, 2022
138
February, 2024
137
June, 2020
50
October, 2022
49
May, 2021
10
January, 2022
9
March, 2023
7
May, 2022
4
March, 2020
3
August, 2017
2
May, 2020
1
August, 2021
1
January, 2020
1
November, 2019
Available data
1923
bed bed3+
152
bed bed9
tsv
7
bed bed9+
4
bigWig
Organism
2101
Homo sapiens
Biosample type
2306
tissue
2101
cell line
1865
primary cell
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
blood
119
embryo
96
lung
77
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
38
kidney
36
mammary gland
34
epithelium
34
intestine
large intestine
31
connective tissue
28
liver
25
pancreas
17
musculature of body
15
penis
10
eye
10
pituitary gland
10
vasculature
8
heart
7
gonad
7
limb
7
testis
6
lymphoid tissue
5
blood vessel
4
mouth
3
adipose tissue
3
artery
3
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2092
AMP
9
community
Genome assembly (visualization)
2081
hg19
308
GRCh38
1
hg18
biosample_type!
in vitro differentiated cells
files.file_type!
tsv
organ_slims!
blood
large intestine
BIOSAMPLE
TYPE
2101 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
differential activity
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
MCF-7
3
2
6
9
5
1
breast cancer cell
9
11
+ See 728 more…
See all biosamples
Download